CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CMQ_5523
(
Grosmannia clavigera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CMQ_5523
T364202_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU16793
M02632_2.00
Neurospora crassa
CGGNWNNNN
NNNNWNCCG
PBM
Weirauch et al.(2014)
pTH8830
0.552
0.789
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFW99102
Zinc cluster
14
55
KACDFCHKRRIKCQENPAGGNRCQNCAEFDIPCTYARPSRRG
Links
Other
Zinc cluster
family TFs
Other
Grosmannia clavigera
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPBR_01374
Sporothrix brasiliensis
SPBR_01374
N
0.600
F503_00921
Ophiostoma piceae uamh
F503_00921
N
0.600
HMPREF1624_03673
Sporothrix schenckii
HMPREF1624_03673
N
0.600
NCU16793
Neurospora crassa
NCU16793
D
0.552
NEUTE1DRAFT_145241
Neurospora tetrasperma
NEUTE1DRAFT_145241
I
0.552