CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
COCC4DRAFT_153890
(
Bipolaris maydis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
COCC4DRAFT_153890
T364614_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_10600
M01373_2.00
Aspergillus nidulans
YCGGAWAW
WTWTCCGR
PBM
Lambert et al.(2019)
pEX0427
0.548
0.526
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH99157
Zinc cluster
42
79
RACDVCKARKSKCSGGQPCDSCARRRVPCQYEATYTRG
Links
Other
Zinc cluster
family TFs
Other
Bipolaris maydis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1.C_90801
Cochliobolus heterostrophus C5
estExt_Genewise1.C_90801
I
0.683
COCMIDRAFT_48551
Bipolaris oryzae
COCMIDRAFT_48551
I
0.610
COCSADRAFT_143282
Bipolaris sorokiniana
COCSADRAFT_143282
I
0.610
COCCADRAFT_40704
Bipolaris zeicola
COCCADRAFT_40704
I
0.610
COCVIDRAFT_39465
Bipolaris victoriae
COCVIDRAFT_39465
I
0.610
HMPREF1624_05727
Sporothrix schenckii
HMPREF1624_05727
I
0.593
MGG_13919
Magnaporthe oryzae
MGG_13919
N
0.566
LEMA_P031570.1
Leptosphaeria maculans
LEMA_P031570.1
I
0.563
MAPG_10268
Magnaporthe poae
MAPG_10268
I
0.558
PFICI_12506
Pestalotiopsis fici
PFICI_12506
I
0.557
GLRG_08945
Colletotrichum graminicola
GLRG_08945
I
0.553
CGGC5_239
Colletotrichum gloeosporioides
CGGC5_239
I
0.553
GLRG_08912
Colletotrichum graminicola
GLRG_08912
I
0.553
CH063_09531
Colletotrichum higginsianum
CH063_09531
I
0.553
CFIO01_05979
Colletotrichum fioriniae
CFIO01_05979
I
0.553
CFIO01_03929
Colletotrichum fioriniae
CFIO01_03929
I
0.553
CSUB01_07904
Colletotrichum sublineola
CSUB01_07904
I
0.553
CADAFLAG00010143
Aspergillus flavus
CADAFLAG00010143
I
0.548
ANIA_10600
Aspergillus nidulans
CADANIAG00005586
D
0.548
CADAORAG00012148
Aspergillus oryzae
CADAORAG00012148
I
0.548
MGG_02226
Magnaporthe oryzae
MGG_02226
I
0.543
GGTG_05646
Gaeumannomyces graminis
GGTG_05646
N
0.543