COCCADRAFT_34914 (Bipolaris zeicola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 COCCADRAFT_34914 T364841_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU00155
M02583_2.00
Neurospora crassa
NNCGGNNNN

NNNNCCGNN
PBM
Weirauch et al.(2014)
pTH8610
0.592 0.842
ASG1
M00088_2.00
Saccharomyces cerevisiae
CGGRDNN

NNHYCCG
PBM
Badis et al.(2008)
ASG1_2140
0.573 0.711
ASG1
M01581_2.00
Saccharomyces cerevisiae
NCGGNDNN

NNHNCCGN
PBM
Zhu et al.(2009)
Asg1
0.573 0.711
ASG1
M07515_2.00
Saccharomyces cerevisiae
CCGGAW

WTCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0275.1
0.573 0.711
ASG1
M08666_2.00
Saccharomyces cerevisiae
CCGGAW

WTCCGG
Misc
DeBoer et al.(2011)
YIL130W_529
0.573 0.711
ASG1
M08667_2.00
Saccharomyces cerevisiae
CCGGVWMHMDBCCGGD

HCCGGVHKDKWBCCGG
Misc
DeBoer et al.(2011)
YIL130W_807
0.573 0.711
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUC35532 Zinc cluster 60 97

Links

Other Zinc cluster family TFs
Other Bipolaris zeicola TFs

Invalid Input OrderBy

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action