COCSADRAFT_39114 (Bipolaris sorokiniana)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 COCSADRAFT_39114 T365295_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANIA_01368
M01340_2.00
Aspergillus nidulans
CGGVNMNWWH

DWWNKNBCCG
PBM
Lambert et al.(2019)
pEX0202
0.583 0.641
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMD61386 Zinc cluster 16 54

Links

Other Zinc cluster family TFs
Other Bipolaris sorokiniana TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00040p00189460 Amborella trichopoda AMTR_s00040p00189460 I 0.000
Aquca_076_00011 Aquilegia coerulea Aquca_076_00011 N 0.000
AtGRF3 Arabidopsis lyrata fgenesh2_kg.4__1676__AT2G36400.1 N 0.000
AtGRF4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001379 N 0.000
AtGRF7 Vitis vinifera VIT_16s0098g01080 N 0.000
BGIOSGA008811 Oryza indica BGIOSGA008811 N 0.000
Bo3g030090 Brassica oleracea Bo3g030090 N 0.000
Bo4g186220 Brassica oleracea Bo4g186220 N 0.000
Bostr.13129s0083 Boechera stricta Bostr.13129s0083 N 0.000
Bostr.23794s0452 Boechera stricta Bostr.23794s0452 N 0.000
Bra005268 Brassica rapa Bra005268 N 0.000
Bra023066 Brassica rapa Bra023066 N 0.000
Bra028541 Brassica rapa Bra028541 N 0.000
BRADI3G51685 Brachypodium distachyon BRADI3G51685 N 0.000
Cagra.0228s0030 Capsella grandiflora Cagra.0228s0030 N 0.000
Cagra.0612s0011 Capsella grandiflora Cagra.0612s0011 N 0.000
Carubv10017366m.g Capsella rubella Carubv10017366m.g N 0.000
Carubv10025172m.g Capsella rubella Carubv10025172m.g N 0.000
cassava2869.m1 Manihot esculenta cassava2869.m1 N 0.000
Ciclev10011856m.g Citrus clementina Ciclev10011856m.g N 0.000
gene12741-v1.0-hybrid Fragaria vesca gene12741-v1.0-hybrid N 0.000
GLYMA04G40880 Glycine max GLYMA04G40880 N 0.000
GLYMA06G13960 Glycine max GLYMA06G13960 N 0.000
Gorai.009G277500 Gossypium raimondii Gorai.009G277500 N 0.000
GRF10 Oryza sativa OS02G0678800 N 0.000
GRF3 Arabidopsis thaliana AT2G36400 N 0.000
GRF4 Arabidopsis thaliana AT3G52910 N 0.000
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.000
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N 0.000
LPERR02G22680 Leersia perrieri LPERR02G22680 N 0.000
MDP0000814056 Malus domestica MDP0000814056 N 0.000
mgf001554m Mimulus guttatus mgf001554m N 0.000
MLOC_80060 Hordeum vulgare MLOC_80060 N 0.000
OBART02G27850 Oryza barthii OBART02G27850 N 0.000
OGLUM02G28430 Oryza glumaepatula OGLUM02G28430 N 0.000
OMERI02G27040 Oryza meridionalis OMERI02G27040 N 0.000
ONIVA02G30970 Oryza nivara ONIVA02G30970 N 0.000
OPUNC02G25570 Oryza punctata OPUNC02G25570 N 0.000
ORGLA02G0239200 Oryza glaberrima ORGLA02G0239200 N 0.000
ORUFI02G29340 Oryza rufipogon ORUFI02G29340 N 0.000
PGSC0003DMG400028259 Solanum tuberosum PGSC0003DMG400028259 N 0.000
PK16254.1 Cannabis sativa PK16254.1 N 0.000
Pm019687 Prunus mume Pm019687 N 0.000
POPTR_0006s11630 Populus trichocarpa POPTR_0006s11630 N 0.000
POPTR_0012s02950 Populus trichocarpa POPTR_0012s02950 N 0.000
PRUPE_ppa024293mg Prunus persica PRUPE_ppa024293mg N 0.000
SapurV1A.0208s0190 Salix purpurea SapurV1A.0208s0190 N 0.000
SapurV1A.0755s0030 Salix purpurea SapurV1A.0755s0030 N 0.000
Solyc09g009200.1 Solanum lycopersicum Solyc09g009200.1 N 0.000
Solyc10g083510.1 Solanum lycopersicum Solyc10g083510.1 N 0.000
TCM_015497 Theobroma cacao TCM_015497 N 0.000
Thhalv10016778m.g Eutrema salsugineum Thhalv10016778m.g N 0.000
VIT_08s0007g03760 Vitis vinifera VIT_08s0007g03760 N 0.000