Ecym_3200 (Eremothecium cymbalariae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 Ecym_3200 T366586_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RSC3
M00082_2.00 		Saccharomyces cerevisiae
GCGCGCGG
CCGCGCGC		 PBM
Badis et al.(2008)
RSC3_2035 		0.592 0.838
RSC3
M01576_2.00 		Saccharomyces cerevisiae
NNNNNSCGNN
NNCGSNNNNN		 PBM
Zhu et al.(2009)
Rsc3 		0.592 0.838
RSC3
M07509_2.00 		Saccharomyces cerevisiae
NNVCGCG
CGCGBNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1 		0.592 0.838
RSC3
M08655_2.00 		Saccharomyces cerevisiae
NNVCGCG
CGCGBNN		 Misc
DeBoer et al.(2011)
YDR303C_580 		0.592 0.838
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET38699 Zinc cluster 14 51

Links

Other Zinc cluster family TFs
Other Eremothecium cymbalariae TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SAKL0G09768g Lachancea kluyveri SAKL0G09768g I 0.669
AACERI_AaceriAAL057C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL057C I 0.651
AGOS_AAL057C Ashbya gossypii AGOS_AAL057C I 0.651
Kpol_1023p41 Vanderwaltozyma polyspora Kpol_1023p41 I 0.594
RSC3 Saccharomyces cerevisiae YDR303C D 0.592
4855_Multiple Saccharomyces paradoxus 4855_Multiple I 0.592
4894_YDR303C Saccharomyces bayanus 4894_YDR303C I 0.592
Scas_Contig588.11 Saccharomyces castellii Scas_Contig588.11 I 0.592
SU7_2665 Saccharomyces arboricola SU7_2665 I 0.592
Kpol_1005p2 Vanderwaltozyma polyspora Kpol_1005p2 I 0.592
SKUD_196709 Saccharomyces kudriavzevii SKUD_196709 I 0.592
NCAS_0F02700 Naumovozyma castellii NCAS_0F02700 I 0.592
NDAI_0C04170 Naumovozyma dairenensis NDAI_0C04170 I 0.592
CAGL0D03850g Candida glabrata CAGL0D03850g N 0.591
TPHA_0E01290 Tetrapisispora phaffii TPHA_0E01290 I 0.586
KAFR_0E01300 Kazachstania africana KAFR_0E01300 I 0.584
TDEL_0E03050 Torulaspora delbrueckii TDEL_0E03050 I 0.578
ZYRO0C13882g Zygosaccharomyces rouxii ZYRO0C13882g I 0.575
ZBAI_03963 Zygosaccharomyces bailii ZBAI_03963 I 0.567
ZBAI_09770 Zygosaccharomyces bailii ZBAI_09770 I 0.567
TBLA_0C03390 Tetrapisispora blattae TBLA_0C03390 I 0.555