CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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FGRRES_05925
(
Fusarium graminearum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
FGRRES_05925
T367823_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_05925
M01413_2.00
Fusarium graminearum
NNYCGGNDN
NHNCCGRNN
PBM
Lambert et al.(2019)
pTH11434
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01413_2.00
Zinc cluster
51
87
LTCTTCRARKVRCNGARDICSNCERLGFPCSYDDGDT
M01413_2.00
Zinc cluster
101
139
QACISCHSRKARCSGHMPSCDRCRSQGIECVYRPSKRAR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEF88194
Zinc cluster
60
96
LTCTTCRARKVRCNGARDICSNCERLGFPCSYDDGDT
CEF88194
Zinc cluster
110
148
QACISCHSRKARCSGHMPSCDRCRSQGIECVYRPSKRAR
Links
Other
Zinc cluster
family TFs
Other
Fusarium graminearum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FPSE_03055
Fusarium pseudograminearum
FPSE_03055
I
0.683
NechaG85112
Fusarium solani
NechaG85112
I
0.640
FVEG_04507
Fusarium verticillioides
FVEG_04507
I
0.640
FFUJ_13062
Fusarium fujikuroi
FFUJ_13062
I
0.640
FOXG_07573
Fusarium oxysporum
FOXG_07573
I
0.640
fgenesh1_pg.sca_6_chr9_2_0000575
Nectria haematococca
fgenesh1_pg.sca_6_chr9_2_0000575
I
0.640
ACRE_076150
Acremonium chrysogenum
ACRE_076150
I
0.569