CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOMPIDRAFT_1142296
(
Fomitopsis pinicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
FOMPIDRAFT_1142296
T368134_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV
BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.619
0.848
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPT03417
Zinc cluster
26
60
VSCAECRRLKLRCDRKVPCETCVKRGCSAICPEGS
Links
Other
Zinc cluster
family TFs
Other
Fomitopsis pinicola
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy