CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GGTG_02924
(
Gaeumannomyces graminis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GGTG_02924
T369309_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-22
M01424_2.00
Neurospora crassa
NNNSBCCGGVVN
NBBCCGGVSNNN
PBM
Lambert et al.(2019)
pTH8929
0.612
0.872
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_02924T0
Zinc cluster
95
133
HSCKLCQLRKVRCDKNKPCANCVKANVECRVVPPLPPRR
Links
Other
Zinc cluster
family TFs
Other
Gaeumannomyces graminis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_176339
Agaricus bisporus
AGABI2DRAFT_176339
I
0.000
BN946_scf185014.g111
Trametes cinnabarina
BN946_scf185014.g111
I
0.000
CC1G_10208
Coprinopsis cinerea
CC1G_10208
I
0.000
CY34DRAFT_301446
Suillus luteus
CY34DRAFT_301446
I
0.000
FIBRA_02011
Fibroporia radiculosa
FIBRA_02011
I
0.000
GALMADRAFT_77741
Galerina marginata
GALMADRAFT_77741
I
0.000
GLOTRDRAFT_35481
Gloeophyllum trabeum
GLOTRDRAFT_35481
I
0.000
gw1.2.1743.1
Heterobasidion annosum
gw1.2.1743.1
I
0.000
HETIRDRAFT_242938
Heterobasidion irregulare
HETIRDRAFT_242938
I
0.000
HYDPIDRAFT_32921
Hydnomerulius pinastri
HYDPIDRAFT_32921
I
0.000
JAAARDRAFT_67635
Jaapia argillacea
JAAARDRAFT_67635
I
0.000
K443DRAFT_105640
Laccaria amethystina
K443DRAFT_105640
I
0.000
K443DRAFT_89912
Laccaria amethystina
K443DRAFT_89912
I
0.000
LACBIDRAFT_147701
Laccaria bicolor
LACBIDRAFT_147701
I
0.000
M378DRAFT_164255
Amanita muscaria
M378DRAFT_164255
I
0.000
M378DRAFT_44572
Amanita muscaria
M378DRAFT_44572
N
0.000
M378DRAFT_59304
Amanita muscaria
M378DRAFT_59304
N
0.000
M378DRAFT_74283
Amanita muscaria
M378DRAFT_74283
I
0.000
M404DRAFT_154909
Pisolithus tinctorius
M404DRAFT_154909
I
0.000
M413DRAFT_440933
Hebeloma cylindrosporum
M413DRAFT_440933
I
0.000
PAXRUDRAFT_162335
Paxillus rubicundulus
PAXRUDRAFT_162335
I
0.000
PFL1_06413
Pseudozyma flocculosa
PFL1_06413
I
0.000
PILCRDRAFT_816387
Piloderma croceum
PILCRDRAFT_816387
I
0.000
PISMIDRAFT_106875
Pisolithus microcarpus
PISMIDRAFT_106875
I
0.000
SCLCIDRAFT_1218516
Scleroderma citrinum
SCLCIDRAFT_1218516
I
0.000
SERLA73DRAFT_60481
Serpula lacrymans
SERLA73DRAFT_60481
I
0.000