CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_03357
(
Gaeumannomyces graminis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GGTG_03357
T369318_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.655
0.771
ANIA_00202
M01349_2.00
Aspergillus nidulans
HBCGGNWWN
NWWNCCGVD
PBM
Lambert et al.(2019)
pEX0397
0.556
0.714
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA
TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.545
0.514
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_03357T0
Zinc cluster
142
176
TGCLTCRERHLKCDEGTPDCLNCRKSRRECRRGVR
Links
Other
Zinc cluster
family TFs
Other
Gaeumannomyces graminis
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy