CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLRG_02919
(
Colletotrichum graminicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GLRG_02919
T369554_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07675
M02625_2.00
Neurospora crassa
NNNNCGSNWV
BWNSCGNNNN
PBM
Weirauch et al.(2014)
pTH8907
0.580
0.769
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFQ27775
Zinc cluster
88
126
SGCYMCRSRRVKCDETRPICDRCRKGSRECIYPEASAPK
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum graminicola
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CSUB01_03432
Colletotrichum sublineola
CSUB01_03432
N
0.622
Cob_10631
Colletotrichum orbiculare
Cob_10631
N
0.612
CGGC5_3069
Colletotrichum gloeosporioides
CGGC5_3069
N
0.612
CFIO01_12540
Colletotrichum fioriniae
CFIO01_12540
I
0.605
MYCTH_2298970
Myceliophthora thermophila
MYCTH_2298970
I
0.589
CH063_02263
Colletotrichum higginsianum
CH063_02263
I
0.588
SMAC_00876
Sordaria macrospora
SMAC_00876
I
0.580
NEUTE1DRAFT_60106
Neurospora tetrasperma
NEUTE1DRAFT_60106
I
0.580
estExt_Genewise1Plus.C_31316
Neurospora discreta
estExt_Genewise1Plus.C_31316
I
0.580
NCU07675
Neurospora crassa
NCU07675
D
0.580
MGG_12339
Magnaporthe oryzae
MGG_12339
I
0.576
S40288_05338
Stachybotrys chartarum
S40288_05338
N
0.571
H102_02976
Trichophyton rubrum
H102_02976
I
0.571
H105_02995
Trichophyton soudanense
H105_02995
I
0.571
S40285_01002
Stachybotrys chlorohalonata
S40285_01002
N
0.571
PFICI_04665
Pestalotiopsis fici
PFICI_04665
I
0.564
e_gw1.7.93.1
Mycosphaerella fijiensis
e_gw1.7.93.1
I
0.559
MYCFIDRAFT_34745
Pseudocercospora fijiensis
MYCFIDRAFT_34745
I
0.559
MPH_12582
Macrophomina phaseolina
MPH_12582
I
0.553
UCRNP2_10087
Neofusicoccum parvum
UCRNP2_10087
I
0.553
PTT_04142
Pyrenophora teres
PTT_04142
N
0.544
PTRG_03090
Pyrenophora triticirepentis
PTRG_03090
N
0.544
DOTSEDRAFT_161080
Dothistroma septosporum
DOTSEDRAFT_161080
I
0.542
MBM_06665
Marssonina brunnea
MBM_06665
I
0.537