GLRG_10212 (Colletotrichum graminicola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 GLRG_10212 T369680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FGRRES_09921
M02577_2.00
Fusarium graminearum
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7794
0.683 1.000
acu-15
M02616_2.00
Neurospora crassa
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7801
0.676 0.950
acu-15
M02617_2.00
Neurospora crassa
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8900
0.676 0.950
ANIA_00689
M11469_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBALL_Q2
0.659 0.925
ANIA_00689
M11470_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCA_Q2
0.659 0.925
ANIA_00689
M11471_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCB_Q2
0.659 0.925
CAT8
M00102_2.00
Saccharomyces cerevisiae
NNNCCGGAN

NTCCGGNNN
PBM
Badis et al.(2008)
CAT8_4532
0.595 0.700
CAT8
M07529_2.00
Saccharomyces cerevisiae
CCGGRN

NYCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0280.1
0.595 0.700
CAT8
M08688_2.00
Saccharomyces cerevisiae
NCGGNNNDVNGGNN

NNCCNBHNNNCCGN
Misc
DeBoer et al.(2011)
YMR280C_33
0.595 0.700
CAT8
M11485_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6_01
0.595 0.700
CAT8
M11486_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6
0.595 0.700
SIP4
M00089_2.00
Saccharomyces cerevisiae
NNNNNNCSGN

NCSGNNNNNN
PBM
Badis et al.(2008)
SIP4_2067
0.540 0.500
SIP4
M01582_2.00
Saccharomyces cerevisiae
NNNNNNNVVD

HBBNNNNNNN
PBM
Zhu et al.(2009)
Sip4
0.540 0.500
SIP4
M07516_2.00
Saccharomyces cerevisiae
YYCGGRR

YYCCGRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0380.1
0.540 0.500
SIP4
M08669_2.00
Saccharomyces cerevisiae
NCGGNYNVMYSGR

YCSRKBNRNCCGN
Misc
DeBoer et al.(2011)
YJL089W_2067
0.540 0.500
SIP4
M08670_2.00
Saccharomyces cerevisiae
YYCGGRR

YYCCGRR
Misc
DeBoer et al.(2011)
YJL089W_573
0.540 0.500
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFQ35068 Zinc cluster 22 61

Links

Other Zinc cluster family TFs
Other Colletotrichum graminicola TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_31341 Aegilops tauschii F775_31341 I 0.000
MLOC_57051 Hordeum vulgare MLOC_57051 I 0.000
Si024816m.g Setaria italica Si024816m.g I 0.000
TRIUR3_34396 Triticum urartu TRIUR3_34396 I 0.000
Traes_1BL_B4AFDB663 Triticum aestivum Traes_1BL_B4AFDB663 I 0.000
Pavir.J41073 Panicum virgatum Pavir.J41073 I 0.000
BRADI2G22230 Brachypodium distachyon BRADI2G22230 I 0.000
Pavir.J07662 Panicum virgatum Pavir.J07662 I 0.000
Pavir.J18239 Panicum virgatum Pavir.J18239 I 0.000
Pavir.J35902 Panicum virgatum Pavir.J35902 I 0.000
Traes_1AL_B24F28600 Triticum aestivum Traes_1AL_B24F28600 I 0.000
Si028270m.g Setaria italica Si028270m.g N 0.000
Si027998m.g Setaria italica Si027998m.g N 0.000
Si027946m.g Setaria italica Si027946m.g N 0.000
Si027769m.g Setaria italica Si027769m.g N 0.000
Si026670m.g Setaria italica Si026670m.g N 0.000
Si010706m.g Setaria italica Si010706m.g N 0.000
Sb05g001170 Sorghum bicolor Sb05g001170 N 0.000
Sb01g036870 Sorghum bicolor Sb01g036870 N 0.000
OS03G0321700 Oryza sativa OS03G0321700 N 0.000
ORUFI12G01140 Oryza rufipogon ORUFI12G01140 N 0.000
ORUFI11G01010 Oryza rufipogon ORUFI11G01010 N 0.000
Si039519m.g Setaria italica Si039519m.g N 0.000
Traes_1AL_309623B48 Triticum aestivum Traes_1AL_309623B48 N 0.000
Traes_1BL_46340D685 Triticum aestivum Traes_1BL_46340D685 N 0.000
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N 0.000
Pavir.Hb02025 Panicum virgatum Pavir.Hb02025 N 0.000
Pavir.Ga02545 Panicum virgatum Pavir.Ga02545 N 0.000
Pavir.Ca00178 Panicum virgatum Pavir.Ca00178 N 0.000
BGIOSGA012523 Oryza indica BGIOSGA012523 N 0.000
TRIUR3_22129 Triticum urartu TRIUR3_22129 N 0.000
TRIUR3_06231 Triticum urartu TRIUR3_06231 N 0.000
Traes_4DL_3140A8240 Triticum aestivum Traes_4DL_3140A8240 N 0.000
Traes_4BL_A8C6FBEB6 Triticum aestivum Traes_4BL_A8C6FBEB6 N 0.000
Traes_4AS_70DF607CC Triticum aestivum Traes_4AS_70DF607CC N 0.000
Traes_1DL_DFE1721E0 Triticum aestivum Traes_1DL_DFE1721E0 N 0.000
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N 0.000
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N 0.000
OBART11G01070 Oryza barthii OBART11G01070 N 0.000
OBART03G15470 Oryza barthii OBART03G15470 N 0.000
OB11G10730 Oryza brachyantha OB11G10730 N 0.000
OB03G25300 Oryza brachyantha OB03G25300 N 0.000
MLOC_57764 Hordeum vulgare MLOC_57764 N 0.000
LPERR11G00940 Leersia perrieri LPERR11G00940 N 0.000
LPERR03G13630 Leersia perrieri LPERR03G13630 N 0.000
GRMZM2G099593 Zea mays GRMZM2G099593 N 0.000
GRMZM2G030272 Zea mays GRMZM2G030272 N 0.000
F775_31089 Aegilops tauschii F775_31089 N 0.000
F775_02926 Aegilops tauschii F775_02926 N 0.000
BRADI1G63910 Brachypodium distachyon BRADI1G63910 N 0.000
BGIOSGA036760 Oryza indica BGIOSGA036760 N 0.000
BGIOSGA034616 Oryza indica BGIOSGA034616 N 0.000
OBART12G00800 Oryza barthii OBART12G00800 N 0.000
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N 0.000
OGLUM12G01250 Oryza glumaepatula OGLUM12G01250 N 0.000
ORGLA11G0201600 Oryza glaberrima ORGLA11G0201600 N 0.000
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N 0.000
OPUNC12G00950 Oryza punctata OPUNC12G00950 N 0.000
OPUNC11G00930 Oryza punctata OPUNC11G00930 N 0.000
OPUNC03G15030 Oryza punctata OPUNC03G15030 N 0.000
ONIVA12G00800 Oryza nivara ONIVA12G00800 N 0.000
ONIVA11G01010 Oryza nivara ONIVA11G01010 N 0.000
ONIVA03G16490 Oryza nivara ONIVA03G16490 N 0.000
OMERI12G00120 Oryza meridionalis OMERI12G00120 N 0.000
OMERI11G01480 Oryza meridionalis OMERI11G01480 N 0.000
OLONG_028722 Oryza longistaminata OLONG_028722 N 0.000
OLONG_022888 Oryza longistaminata OLONG_022888 N 0.000
OLONG_001744 Oryza longistaminata OLONG_001744 N 0.000
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N 0.000
BGIOSGA012525 Oryza indica BGIOSGA012525 N 0.000