GMDG_00261 (Pseudogymnoascus destructans)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 GMDG_00261 T369711_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANIA_04558
M02572_2.00
Aspergillus nidulans
NHCGGRWNN

NNWYCCGDN
PBM
Weirauch et al.(2014)
pTH8214
0.619 0.875
NCU01478
M02590_2.00
Neurospora crassa
NNCGGVNNN

NNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8961
0.611 0.875
ASG1
M00088_2.00
Saccharomyces cerevisiae
CGGRDNN

NNHYCCG
PBM
Badis et al.(2008)
ASG1_2140
0.551 0.600
ASG1
M01581_2.00
Saccharomyces cerevisiae
NCGGNDNN

NNHNCCGN
PBM
Zhu et al.(2009)
Asg1
0.551 0.600
ASG1
M07515_2.00
Saccharomyces cerevisiae
CCGGAW

WTCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0275.1
0.551 0.600
ASG1
M08666_2.00
Saccharomyces cerevisiae
CCGGAW

WTCCGG
Misc
DeBoer et al.(2011)
YIL130W_529
0.551 0.600
ASG1
M08667_2.00
Saccharomyces cerevisiae
CCGGVWMHMDBCCGGD

HCCGGVHKDKWBCCGG
Misc
DeBoer et al.(2011)
YIL130W_807
0.551 0.600
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ELR06644 Zinc cluster 71 110

Links

Other Zinc cluster family TFs
Other Pseudogymnoascus destructans TFs

274 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.000
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.000
DREB2A Arabidopsis thaliana AT5G05410 D 0.000
DREB2B Arabidopsis thaliana AT3G11020 I 0.000
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.000
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.000
Bo9g177130 Brassica oleracea Bo9g177130 I 0.000
Bo2g006960 Brassica oleracea Bo2g006960 I 0.000
Bo1g141310 Brassica oleracea Bo1g141310 I 0.000
Bo3g063910 Brassica oleracea Bo3g063910 I 0.000
Bo5g136930 Brassica oleracea Bo5g136930 I 0.000
Bra034159 Brassica rapa Bra034159 I 0.000
Bra029889 Brassica rapa Bra029889 I 0.000
Bra028759 Brassica rapa Bra028759 I 0.000
Bra005852 Brassica rapa Bra005852 I 0.000
Bra001386 Brassica rapa Bra001386 I 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.000
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.000
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.000
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.000
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.000
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.000
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.000
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.000
Cla006713 Citrullus lanatus Cla006713 I 0.000
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.000
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.000
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.000
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.000
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.000
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.000
MDP0000147009 Malus domestica MDP0000147009 I 0.000
MDP0000446783 Malus domestica MDP0000446783 I 0.000
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.000
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.000
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.000
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.000
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.000
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.000
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.000
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
29729.m002292 Ricinus communis 29729.m002292 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.000
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.000
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.000