HPODL_00249 (Ogataea parapolymorpha)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 HPODL_00249 T371247_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEU3
M01590_2.00 		Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN		 PBM
Zhu et al.(2009)
Leu3 		0.552 0.675
LEU3
M07526_2.00 		Saccharomyces cerevisiae
CCKDHDSCGS
SCGSHDHMGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0324.1 		0.552 0.675
LEU3
M08684_2.00 		Saccharomyces cerevisiae
SCKNNNNMGS
SCKNNNNMGS		 Misc
DeBoer et al.(2011)
YLR451W_781 		0.552 0.675
LEU3
M11482_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$LEU3_B 		0.552 0.675
LEU3
M11483_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$LEU3_Q6 		0.552 0.675
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESX00834 Zinc cluster 21 63

Links

Other Zinc cluster family TFs
Other Ogataea parapolymorpha TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PICST_60934 Scheffersomyces stipitis PICST_60934 I 0.582
e_gww1.5.1.126.1 Pichia stipitis e_gww1.5.1.126.1 I 0.582
PAS_chr3_0759 Komagataella pastoris PAS_chr3_0759 N 0.581
XP_002492988.1 Pichia pastoris XP_002492988.1 N 0.581
ZBAI_01033 Zygosaccharomyces bailii ZBAI_01033 I 0.552
LEU3 Saccharomyces cerevisiae YLR451W D 0.552
ZBAI_07505 Zygosaccharomyces bailii ZBAI_07505 I 0.552
ZYRO0D01650g Zygosaccharomyces rouxii ZYRO0D01650g I 0.552
15505_Multiple Saccharomyces mikatae 15505_Multiple I 0.552
15147_YLR451W Saccharomyces paradoxus 15147_YLR451W I 0.552
TDEL_0H00590 Torulaspora delbrueckii TDEL_0H00590 I 0.552
17250_YLR451W Saccharomyces bayanus 17250_YLR451W I 0.552
SU7_2407 Saccharomyces arboricola SU7_2407 I 0.552
CAGL0H00396g Candida glabrata CAGL0H00396g I 0.552
Ecym_7203 Eremothecium cymbalariae Ecym_7203 I 0.552
SAKL0F15444g Lachancea kluyveri SAKL0F15444g I 0.548
CPAG_00528 Candida parapsilosis CPAG_00528 I 0.545
CORT_0B02970 Candida orthopsilosis CORT_0B02970 I 0.545
Scas_Contig610.9 Saccharomyces castellii Scas_Contig610.9 I 0.545
SPAPADRAFT_152650 Spathaspora passalidarum SPAPADRAFT_152650 I 0.545
NCAS_0A15020 Naumovozyma castellii NCAS_0A15020 I 0.545
Scas_Contig691.32 Saccharomyces castellii Scas_Contig691.32 I 0.544
NDAI_0D00220 Naumovozyma dairenensis NDAI_0D00220 I 0.544
NCAS_0H00270 Naumovozyma castellii NCAS_0H00270 I 0.544
LALA0_S01e18382g Lachancea lanzarotensis LALA0_S01e18382g I 0.544
KNAG_0D05240 Kazachstania naganishii KNAG_0D05240 I 0.539