Kpol_1002p5 (Vanderwaltozyma polyspora)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 Kpol_1002p5 T371862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RGT1
M00092_2.00
Saccharomyces cerevisiae
CGGRDNWWHN

NDWWNHYCCG
PBM
Badis et al.(2008)
RGT1_2131
0.659 0.800
RGT1
M01585_2.00
Saccharomyces cerevisiae
HCGGADNWWN

NWWNHTCCGD
PBM
Zhu et al.(2009)
Rgt1
0.659 0.800
RGT1
M07518_2.00
Saccharomyces cerevisiae
NCGGADNAWHN

NDWTNHTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1
0.659 0.800
RGT1
M08673_2.00
Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN

NNNNDRTTWWTCCGRNNNHN
Misc
DeBoer et al.(2011)
YKL038W_803
0.659 0.800
RGT1
M11480_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RGT1_Q5
0.659 0.800
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO19360 Zinc cluster 73 114

Links

Other Zinc cluster family TFs
Other Vanderwaltozyma polyspora TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
13522_YKL038W Saccharomyces mikatae 13522_YKL038W I 0.641
13626_YKL038W Saccharomyces paradoxus 13626_YKL038W I 0.659
14629_YKL038W Saccharomyces bayanus 14629_YKL038W I 0.650
AACERI_AaceriAGL083W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL083W I 0.595
AGOS_AGL083W Ashbya gossypii AGOS_AGL083W I 0.595
CAGL0L01903g Candida glabrata CAGL0L01903g I 0.575
Ecym_7239 Eremothecium cymbalariae Ecym_7239 I 0.574
KNAG_0A07100 Kazachstania naganishii KNAG_0A07100 I 0.633
NCAS_0A04750 Naumovozyma castellii NCAS_0A04750 I 0.562
NDAI_0K01800 Naumovozyma dairenensis NDAI_0K01800 I 0.563
RGT1 Saccharomyces cerevisiae YKL038W D 0.659
SAKL0A09856g Lachancea kluyveri SAKL0A09856g I 0.583
Scas_Contig625.5 Saccharomyces castellii Scas_Contig625.5 I 0.562
SU7_2014 Saccharomyces arboricola SU7_2014 I 0.658
TDEL_0B06360 Torulaspora delbrueckii TDEL_0B06360 I 0.559
TPHA_0C04280 Tetrapisispora phaffii TPHA_0C04280 I 0.611
ZBAI_03469 Zygosaccharomyces bailii ZBAI_03469 I 0.592
ZBAI_08469 Zygosaccharomyces bailii ZBAI_08469 I 0.592
ZYRO0E05676g Zygosaccharomyces rouxii ZYRO0E05676g I 0.592