Kpol_1023p41 (Vanderwaltozyma polyspora)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 Kpol_1023p41 T371868_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RSC3
M00082_2.00 		Saccharomyces cerevisiae
GCGCGCGG
CCGCGCGC		 PBM
Badis et al.(2008)
RSC3_2035 		0.609 0.816
RSC3
M01576_2.00 		Saccharomyces cerevisiae
NNNNNSCGNN
NNCGSNNNNN		 PBM
Zhu et al.(2009)
Rsc3 		0.609 0.816
RSC3
M07509_2.00 		Saccharomyces cerevisiae
NNVCGCG
CGCGBNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1 		0.609 0.816
RSC3
M08655_2.00 		Saccharomyces cerevisiae
NNVCGCG
CGCGBNN		 Misc
DeBoer et al.(2011)
YDR303C_580 		0.609 0.816
RSC30
M00086_2.00 		Saccharomyces cerevisiae
NGCGCGCGSN
NSCGCGCGCN		 PBM
Badis et al.(2008)
RSC30_2087 		0.539 0.763
RSC30
M01580_2.00 		Saccharomyces cerevisiae
NNDCGSVNN
NNBSCGHNN		 PBM
Zhu et al.(2009)
Rsc30 		0.539 0.763
RSC30
M07513_2.00 		Saccharomyces cerevisiae
VSCGCGCS
SGCGCGSB		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0375.1 		0.539 0.763
RSC30
M08663_2.00 		Saccharomyces cerevisiae
HNHVHCSCGCGCGSGNDVSVN
NBSBHNCSCGCGCGSGDBDND		 Misc
DeBoer et al.(2011)
YHR056C_857 		0.539 0.763
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO18872 Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Vanderwaltozyma polyspora TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NDAI_0C04170 Naumovozyma dairenensis NDAI_0C04170 I 0.609
SKUD_196709 Saccharomyces kudriavzevii SKUD_196709 I 0.609
RSC3 Saccharomyces cerevisiae YDR303C D 0.609
NCAS_0F02700 Naumovozyma castellii NCAS_0F02700 I 0.609
Kpol_1005p2 Vanderwaltozyma polyspora Kpol_1005p2 I 0.609
4894_YDR303C Saccharomyces bayanus 4894_YDR303C I 0.609
4855_Multiple Saccharomyces paradoxus 4855_Multiple I 0.609
Scas_Contig588.11 Saccharomyces castellii Scas_Contig588.11 I 0.609
SU7_2665 Saccharomyces arboricola SU7_2665 I 0.609
TPHA_0E01290 Tetrapisispora phaffii TPHA_0E01290 I 0.603
KAFR_0E01300 Kazachstania africana KAFR_0E01300 I 0.601
TBLA_0C03390 Tetrapisispora blattae TBLA_0C03390 I 0.597
Ecym_3200 Eremothecium cymbalariae Ecym_3200 I 0.594
ZYRO0C13882g Zygosaccharomyces rouxii ZYRO0C13882g I 0.592
AACERI_AaceriAAL057C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL057C I 0.586
AGOS_AAL057C Ashbya gossypii AGOS_AAL057C I 0.586
ZBAI_03963 Zygosaccharomyces bailii ZBAI_03963 I 0.584
ZBAI_09770 Zygosaccharomyces bailii ZBAI_09770 I 0.584
SAKL0G09768g Lachancea kluyveri SAKL0G09768g I 0.580
TDEL_0E03050 Torulaspora delbrueckii TDEL_0E03050 I 0.571
9825_Multiple Saccharomyces mikatae 9825_Multiple I 0.539
10181_Multiple Saccharomyces paradoxus 10181_Multiple I 0.539
SU7_1441 Saccharomyces arboricola SU7_1441 I 0.539
RSC30 Saccharomyces cerevisiae YHR056C D 0.539
10337_Multiple Saccharomyces bayanus 10337_Multiple I 0.539