CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LACBIDRAFT_254611
(
Laccaria bicolor
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
LACBIDRAFT_254611
T372072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-2
M02599_2.00
Neurospora crassa
NNNNCGGRN
NYCCGNNNN
PBM
Weirauch et al.(2014)
pTH8944
0.571
0.784
SCHCODRAFT_110010
M01418_2.00
Schizophyllum commune
NWYCGGAABN
NVTTCCGRWN
PBM
Lambert et al.(2019)
pTH9839
0.540
0.865
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDR01523
Zinc cluster
9
47
HACLYCRRSHMTCDDGRPCQRCIKREIGHLCHDEHRSRP
Links
Other
Zinc cluster
family TFs
Other
Laccaria bicolor
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy