CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LACBIDRAFT_296682
(
Laccaria bicolor
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
LACBIDRAFT_296682
T372078_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_04558
M02572_2.00
Aspergillus nidulans
NHCGGRWNN
NNWYCCGDN
PBM
Weirauch et al.(2014)
pTH8214
0.543
0.538
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDR09003
Zinc cluster
27
69
RACDICRRKKIRCDGVQMPGNRCSNCILCSFDCTYVEAAKKRG
Links
Other
Zinc cluster
family TFs
Other
Laccaria bicolor
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000014036
Astyanax mexicanus
ENSAMXG00000014036
N
0.000
ENSGMOG00000009994
Gadus morhua
ENSGMOG00000009994
N
0.000
ENSLOCG00000008937
Lepisosteus oculatus
ENSLOCG00000008937
N
0.000
ENSPFOG00000004698
Poecilia formosa
ENSPFOG00000004698
N
0.000
ENSXMAG00000018912
Xiphophorus maculatus
ENSXMAG00000018912
N
0.000
foxh1
Xenopus tropicalis
XB-GENE-1194372
I
0.000
foxh1
Takifugu rubripes
ENSTRUG00000006708
N
0.000
foxh1
Tetraodon nigroviridis
ENSTNIG00000008148
N
0.000
foxh1
Oryzias latipes
ENSORLG00000007331
N
0.000
foxh1
Danio rerio
ENSDARG00000055630
N
0.000
foxh1.L
Xenopus laevis
XB-GENE-1194377
I
0.000
Pvit_18746
Pogona vitticeps
Pvit_18746
I
0.000