CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LEMA_P054920.1
(
Leptosphaeria maculans
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
LEMA_P054920.1
T372306_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01368
M01340_2.00
Aspergillus nidulans
CGGVNMNWWH
DWWNKNBCCG
PBM
Lambert et al.(2019)
pEX0202
0.556
0.641
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBX92786
Zinc cluster
9
47
SACDECRSRKLKCSGDTPVCVRCKKEGIGCVYSPQKQMG
Links
Other
Zinc cluster
family TFs
Other
Leptosphaeria maculans
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy