CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_36178
(
Serendipita vermifera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
M408DRAFT_36178
T372589_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01478
M02590_2.00
Neurospora crassa
NNCGGVNNN
NNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8961
0.551
0.541
ANIA_04558
M02572_2.00
Aspergillus nidulans
NHCGGRWNN
NNWYCCGDN
PBM
Weirauch et al.(2014)
pTH8214
0.542
0.541
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM33292
Zinc cluster
16
55
RACDVCRRKKIRCDGPTMTSGKCTNCITYSYDCTYVEIAK
Links
Other
Zinc cluster
family TFs
Other
Serendipita vermifera
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy