NDAI_0D02730 (Naumovozyma dairenensis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 NDAI_0D02730 T375433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YLR278C
M00099_2.00
Saccharomyces cerevisiae
NNNCGGVVNN

NNBBCCGNNN
PBM
Badis et al.(2008)
YLR278C_2147
0.593 0.718
YLR278C
M00926_2.00
Saccharomyces cerevisiae
NBCGGAGTTN

NAACTCCGVN
PBM
Gordan et al.(2011)
Ylr278c
0.593 0.718
YLR278C
M07525_2.00
Saccharomyces cerevisiae
NCGGAGWW

WWCTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0430.1
0.593 0.718
YLR278C
M08683_2.00
Saccharomyces cerevisiae
NCGGAGWW

WWCTCCGN
Misc
DeBoer et al.(2011)
YLR278C_589
0.593 0.718
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCD24587 Zinc cluster 39 77

Links

Other Zinc cluster family TFs
Other Naumovozyma dairenensis TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G479885 Zea mays GRMZM2G479885 D 0.000
BGIOSGA037592 Oryza indica BGIOSGA037592 I 0.000
ORGLA11G0215100 Oryza glaberrima ORGLA11G0215100 I 0.000
ORGLA12G0138000 Oryza glaberrima ORGLA12G0138000 I 0.000
ORUFI12G17520 Oryza rufipogon ORUFI12G17520 I 0.000
Sb08g018170 Sorghum bicolor Sb08g018170 I 0.000
Si023541m.g Setaria italica Si023541m.g I 0.000
Traes_5BS_FF44610EF1 Triticum aestivum Traes_5BS_FF44610EF1 I 0.000
Pavir.Ca02565 Panicum virgatum Pavir.Ca02565 I 0.000
OPUNC12G14150 Oryza punctata OPUNC12G14150 I 0.000
ONIVA12G14510 Oryza nivara ONIVA12G14510 I 0.000
OMERI02G09390 Oryza meridionalis OMERI02G09390 I 0.000
OGLUM12G17310 Oryza glumaepatula OGLUM12G17310 I 0.000
OBART12G15770 Oryza barthii OBART12G15770 I 0.000
MLOC_51930 Hordeum vulgare MLOC_51930 I 0.000
LPERR12G12950 Leersia perrieri LPERR12G12950 I 0.000
GRMZM2G160902 Zea mays GRMZM2G160902 I 0.000
F775_30589 Aegilops tauschii F775_30589 I 0.000
BRADI4G04720 Brachypodium distachyon BRADI4G04720 I 0.000
Pavir.Cb00560 Panicum virgatum Pavir.Cb00560 I 0.000