CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAXRUDRAFT_36013
(
Paxillus rubicundulus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PAXRUDRAFT_36013
T376999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_110010
M01418_2.00
Schizophyllum commune
NWYCGGAABN
NVTTCCGRWN
PBM
Lambert et al.(2019)
pTH9839
0.596
0.897
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK81028
Zinc cluster
41
81
HACLYCRRSHMTCDEGRPCQRCIKREIGHLCHDEQRPPKNK
Links
Other
Zinc cluster
family TFs
Other
Paxillus rubicundulus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy