CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDE_01040
(
Penicillium oxalicum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PDE_01040
T377376_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_03835
M01367_2.00
Aspergillus nidulans
NYRBNNNNNN
NNNNNNVYRN
PBM
Lambert et al.(2019)
pEX0231
0.572
0.718
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPS26104
Zinc cluster
30
68
RACDQCKFRKIKCSLSQPCKACQSMGFDCTFLQPQKKRG
Links
Other
Zinc cluster
family TFs
Other
Penicillium oxalicum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
U727_00434080151
Penicillium solitum
U727_00434080151
I
0.629
Pc12g04420
Penicillium chrysogenum
Pc12g04420
I
0.629
PITC_071900
Penicillium italicum
PITC_071900
I
0.629
PEX1_067180
Penicillium expansum
PEX1_067180
I
0.629
PCH_Pc12g04420
Penicillium rubens
PCH_Pc12g04420
I
0.629
EURHEDRAFT_410305
Aspergillus ruber
EURHEDRAFT_410305
I
0.612
ACLA_095540
Aspergillus clavatus
CADACLAG00009194
I
0.584
TSTA_119150
Talaromyces stipitatus
TSTA_119150
I
0.574
ANIA_03835
Aspergillus nidulans
CADANIAG00004871
D
0.572