CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_055050
(
Talaromyces marneffei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PMAA_055050
T379156_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
amdR
M01363_2.00
Aspergillus nidulans
NNCGGHNNNN
NNNNDCCGNN
PBM
Lambert et al.(2019)
pEX0227
0.608
0.816
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEA21710
Zinc cluster
23
64
AACVHCHRRKVKCDAQSVGFPCSNCQSSGKTDCRIHEKKKRP
Links
Other
Zinc cluster
family TFs
Other
Talaromyces marneffei
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy