CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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PVAR5_2620
(
Byssochlamys spectabilis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PVAR5_2620
T382491_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01848
M01400_2.00
Aspergillus nidulans
NVGCGBBWVN
NBWVVCGCBN
PBM
Lambert et al.(2019)
pEX0279
0.546
0.842
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAD94000
Zinc cluster
51
88
SGCYTCRLRRKKCDEKHPSCSACINLGVKCEYSRPLWW
Links
Other
Zinc cluster
family TFs
Other
Byssochlamys spectabilis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy