CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PVAR5_6560
(
Byssochlamys spectabilis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PVAR5_6560
T382555_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_05620
M02579_2.00
Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN
PBM
Weirauch et al.(2014)
pTH8594
0.659
0.975
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAD97876
Zinc cluster
125
168
IACRYCRRRKIRCSGFESSQDGRCSNCIRFNQECMFTPVSSQAQ
Links
Other
Zinc cluster
family TFs
Other
Byssochlamys spectabilis
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy