CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCHCODRAFT_108853
(
Schizophyllum commune
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SCHCODRAFT_108853
T383391_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00155
M02583_2.00
Neurospora crassa
NNCGGNNNN
NNNNCCGNN
PBM
Weirauch et al.(2014)
pTH8610
0.553
0.590
ANIA_04558
M02572_2.00
Aspergillus nidulans
NHCGGRWNN
NNWYCCGDN
PBM
Weirauch et al.(2014)
pTH8214
0.544
0.538
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFI97217
Zinc cluster
25
67
RACDQCRRKKIRCDGVQSNSKPCSNCSAYGYECTYIQTAKARS
Links
Other
Zinc cluster
family TFs
Other
Schizophyllum commune
TFs
237 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy