CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_150184
(
Sphaerulina musiva
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SEPMUDRAFT_150184
T383573_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
xlr-1
M02621_2.00
Neurospora crassa
NNNNWNNNN
NNNNWNNNN
PBM
Weirauch et al.(2014)
pTH9683
0.544
0.525
qa-1F
M11489_2.00
Neurospora crassa
HHGGNTAADBVYTYAWCCBB
VVGGWTRARBVHTTANCCDD
Transfac
Matys et al.(2006)
F$QA1F_01
0.540
0.625
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF11183
Zinc cluster
39
78
RACDQCRAGREKCDGNRPCCQTCDAQGRSCTYYEQPKKRG
Links
Other
Zinc cluster
family TFs
Other
Sphaerulina musiva
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy