SKUD_160102 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_160102 T383873_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UGA3
M00079_2.00 		Saccharomyces cerevisiae
GCGSNNNNN
NNNNNSCGC		 PBM
Badis et al.(2008)
UGA3_4522 		0.563 0.900
UGA3
M07506_2.00 		Saccharomyces cerevisiae
BSGCGGSA
TSCCGCSV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0410.1 		0.563 0.900
UGA3
M08649_2.00 		Saccharomyces cerevisiae
BSGCGGSA
TSCCGCSV		 Misc
DeBoer et al.(2011)
YDL170W_486 		0.563 0.900
UGA3
M08650_2.00 		Saccharomyces cerevisiae
CCGNNNNCGG
CCGNNNNCGG		 Misc
DeBoer et al.(2011)
YDL170W_651 		0.563 0.900
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT44864 Zinc cluster 15 54

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
3364_YDL170W Saccharomyces bayanus 3364_YDL170W I 0.590
SU7_0466 Saccharomyces arboricola SU7_0466 I 0.588
3145_YDL170W Saccharomyces paradoxus 3145_YDL170W I 0.563
2597_YDL170W Saccharomyces mikatae 2597_YDL170W I 0.563
UGA3 Saccharomyces cerevisiae YDL170W D 0.563