SKUD_181303 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_181303 T383879_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARO80
M01577_2.00
Saccharomyces cerevisiae
NNCGGNDNN

NNHNCCGNN
PBM
Zhu et al.(2009)
Aro80
0.571 0.769
ARO80
M08656_2.00
Saccharomyces cerevisiae
CGGHHVNBNDCGG

CCGHNVNBDDCCG
Misc
DeBoer et al.(2011)
YDR421W_1509
0.571 0.769
ARO80
M08657_2.00
Saccharomyces cerevisiae
CGGYWANNNNCGGYWANNNNCGGYWA

TWRCCGNNNNTWRCCGNNNNTWRCCG
Misc
DeBoer et al.(2011)
YDR421W_725
0.571 0.769
ARO80
M08658_2.00
Saccharomyces cerevisiae
BNNNNNBCTCGGBWABDNNDN

NHNNHVTWVCCGAGVNNNNNV
Misc
DeBoer et al.(2011)
YDR421W_877
0.571 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42408 Zinc cluster 23 67

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
5132_YDR421W Saccharomyces mikatae 5132_YDR421W N 0.564
5419_Multiple Saccharomyces bayanus 5419_Multiple N 0.566
5688_YDR421W Saccharomyces paradoxus 5688_YDR421W I 0.597
ARO80 Saccharomyces cerevisiae YDR421W D 0.571