CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_03654
(
Sordaria macrospora
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SMAC_03654
T383945_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
tah-2
M02593_2.00
Neurospora crassa
CGGRDNNN
NNNHYCCG
PBM
Weirauch et al.(2014)
pTH9012
0.617
0.842
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC09622
Zinc cluster
75
114
NACDVCKRRKVKCNGQKPCTYCLSRKLPSLCVYSPPKQRR
Links
Other
Zinc cluster
family TFs
Other
Sordaria macrospora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_131430
Neurospora tetrasperma
NEUTE1DRAFT_131430
I
0.617
tah-2
Neurospora crassa
NCU02214
D
0.617
estExt_Genewise1Plus.C_90494
Neurospora discreta
estExt_Genewise1Plus.C_90494
I
0.600