CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SNOG_00466
(
Phaeosphaeria nodorum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SNOG_00466
T384010_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ada-3
M01421_2.00
Neurospora crassa
VCKCGCGA
TCGCGMGB
PBM
Lambert et al.(2019)
pTH8620
0.625
0.811
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_00466
Zinc cluster
95
131
RSCVTCRRRKVKCDKRHPCSNCTRAKIECIFPGPGRA
Links
Other
Zinc cluster
family TFs
Other
Phaeosphaeria nodorum
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy