CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SS1G_00816
(
Sclerotinia sclerotiorum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SS1G_00816
T384502_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-5
M02619_2.00
Neurospora crassa
NNNHCGDNNN
NNNHCGDNNN
PBM
Weirauch et al.(2014)
pTH8350
0.683
0.949
vad-5
M02620_2.00
Neurospora crassa
NNYCGGNWN
NWNCCGRNN
PBM
Weirauch et al.(2014)
pTH8902
0.683
0.949
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDN91413
Zinc cluster
15
54
PSCDACRERKVKCDATETSSCSECSSRNVKCQFTKETNRR
Links
Other
Zinc cluster
family TFs
Other
Sclerotinia sclerotiorum
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy