SU7_1441 (Saccharomyces arboricola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SU7_1441 T384569_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RSC30
M00086_2.00
Saccharomyces cerevisiae
NGCGCGCGSN

NSCGCGCGCN
PBM
Badis et al.(2008)
RSC30_2087
0.683 1.000
RSC30
M01580_2.00
Saccharomyces cerevisiae
NNDCGSVNN

NNBSCGHNN
PBM
Zhu et al.(2009)
Rsc30
0.683 1.000
RSC30
M07513_2.00
Saccharomyces cerevisiae
VSCGCGCS

SGCGCGSB
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0375.1
0.683 1.000
RSC30
M08663_2.00
Saccharomyces cerevisiae
HNHVHCSCGCGCGSGNDVSVN

NBSBHNCSCGCGCGSGDBDND
Misc
DeBoer et al.(2011)
YHR056C_857
0.683 1.000
RSC3
M00082_2.00
Saccharomyces cerevisiae
GCGCGCGG

CCGCGCGC
PBM
Badis et al.(2008)
RSC3_2035
0.537 0.816
RSC3
M01576_2.00
Saccharomyces cerevisiae
NNNNNSCGNN

NNCGSNNNNN
PBM
Zhu et al.(2009)
Rsc3
0.537 0.816
RSC3
M07509_2.00
Saccharomyces cerevisiae
NNVCGCG

CGCGBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1
0.537 0.816
RSC3
M08655_2.00
Saccharomyces cerevisiae
NNVCGCG

CGCGBNN
Misc
DeBoer et al.(2011)
YDR303C_580
0.537 0.816
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS43424 Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces arboricola TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RSC30 Saccharomyces cerevisiae YHR056C D 0.683
10181_Multiple Saccharomyces paradoxus 10181_Multiple I 0.683
10337_Multiple Saccharomyces bayanus 10337_Multiple I 0.683
9825_Multiple Saccharomyces mikatae 9825_Multiple I 0.683
KAFR_0D04590 Kazachstania africana KAFR_0D04590 I 0.562
TBLA_0A02950 Tetrapisispora blattae TBLA_0A02950 I 0.550
AACERI_AaceriAAL057C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL057C I 0.539
Kpol_1023p41 Vanderwaltozyma polyspora Kpol_1023p41 I 0.539
AGOS_AAL057C Ashbya gossypii AGOS_AAL057C I 0.539
4894_YDR303C Saccharomyces bayanus 4894_YDR303C I 0.537
Scas_Contig588.11 Saccharomyces castellii Scas_Contig588.11 I 0.537
4855_Multiple Saccharomyces paradoxus 4855_Multiple I 0.537
SU7_2665 Saccharomyces arboricola SU7_2665 I 0.537
Kpol_1005p2 Vanderwaltozyma polyspora Kpol_1005p2 I 0.537
NCAS_0F02700 Naumovozyma castellii NCAS_0F02700 I 0.537
NDAI_0C04170 Naumovozyma dairenensis NDAI_0C04170 I 0.537
SKUD_196709 Saccharomyces kudriavzevii SKUD_196709 I 0.537
RSC3 Saccharomyces cerevisiae YDR303C D 0.537