CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TRIVIDRAFT_229893
(
Trichoderma virens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
TRIVIDRAFT_229893
T385747_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-21
M02600_2.00
Neurospora crassa
CGGMGWTA
TAWCKCCG
PBM
Weirauch et al.(2014)
pTH8945
0.595
0.771
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK24515
Zinc cluster
25
61
ISCTECHRRKQKCDRELPCGNCRSRNKEAHCAYEAGA
Links
Other
Zinc cluster
family TFs
Other
Trichoderma virens
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.sca_3_chr4_2_0000157
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000157
I
0.637
NechaG92542
Fusarium solani
NechaG92542
I
0.637
TRIATDRAFT_315339
Trichoderma atroviride
TRIATDRAFT_315339
I
0.630
CHGG_08197
Chaetomium globosum
CHGG_08197
I
0.595
col-21
Neurospora crassa
NCU03489
D
0.595
Cob_03888
Colletotrichum orbiculare
Cob_03888
I
0.595
FPSE_06556
Fusarium pseudograminearum
FPSE_06556
I
0.564
FGRRES_05157
Fusarium graminearum
FGRRES_05157
I
0.564
CH063_11230
Colletotrichum higginsianum
CH063_11230
I
0.548
SMAC_07224
Sordaria macrospora
SMAC_07224
I
0.548
UCRPA7_8227
Togninia minima
UCRPA7_8227
I
0.548
NEUTE1DRAFT_66044
Neurospora tetrasperma
NEUTE1DRAFT_66044
I
0.548
GLRG_08668
Colletotrichum graminicola
GLRG_08668
I
0.548
PODANS_6_4250
Podospora anserina
PODANS_6_4250
I
0.548
CFIO01_04511
Colletotrichum fioriniae
CFIO01_04511
I
0.548
e_gw1.2.156.1
Cryphonectria parasitica
e_gw1.2.156.1
I
0.547
MYCTH_2311492
Myceliophthora thermophila
MYCTH_2311492
I
0.547