TRV_03094 (Trichophyton verrucosum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 TRV_03094 T385895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANIA_00835
M01344_2.00
Aspergillus nidulans
DTCCGGAA

TTCCGGAH
PBM
Lambert et al.(2019)
pEX0389
0.581 0.632
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFE42179 Zinc cluster 27 64

Links

Other Zinc cluster family TFs
Other Trichophyton verrucosum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI1G33550 Brachypodium distachyon BRADI1G33550 I 0.000
BRADI3G04410 Brachypodium distachyon BRADI3G04410 I 0.000
GRMZM2G052720 Zea mays GRMZM2G052720 N 0.000
GRMZM2G175543 Zea mays GRMZM2G175543 N 0.000
GRMZM2G322672 Zea mays GRMZM2G322672 N 0.000
LPERR02G03850 Leersia perrieri LPERR02G03850 N 0.000
LPERR06G21240 Leersia perrieri LPERR06G21240 N 0.000
OBART02G04420 Oryza barthii OBART02G04420 N 0.000
OBART06G25530 Oryza barthii OBART06G25530 N 0.000
OGLUM02G04330 Oryza glumaepatula OGLUM02G04330 N 0.000
OGLUM06G26910 Oryza glumaepatula OGLUM06G26910 N 0.000
OMERI02G05190 Oryza meridionalis OMERI02G05190 N 0.000
OMERI06G25700 Oryza meridionalis OMERI06G25700 N 0.000
ONIVA06G28540 Oryza nivara ONIVA06G28540 N 0.000
OPUNC06G23160 Oryza punctata OPUNC06G23160 N 0.000
ORGLA02G0040900 Oryza glaberrima ORGLA02G0040900 N 0.000
ORUFI06G27450 Oryza rufipogon ORUFI06G27450 N 0.000
OS06G0691100 Oryza sativa OS06G0691100 N 0.000
Pavir.Db00303 Panicum virgatum Pavir.Db00303 N 0.000
Sb10g028110 Sorghum bicolor Sb10g028110 N 0.000