TSTA_033840 (Talaromyces stipitatus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 TSTA_033840 T385989_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANIA_04558
M02572_2.00
Aspergillus nidulans
NHCGGRWNN

NNWYCCGDN
PBM
Weirauch et al.(2014)
pTH8214
0.654 0.950
NCU01478
M02590_2.00
Neurospora crassa
NNCGGVNNN

NNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8961
0.626 0.850
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EED20142 Zinc cluster 57 96

Links

Other Zinc cluster family TFs
Other Talaromyces stipitatus TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29728.m000821 Ricinus communis 29728.m000821 N 0.000
Aquca_023_00033 Aquilegia coerulea Aquca_023_00033 N 0.000
BGIOSGA009486 Oryza indica BGIOSGA009486 N 0.000
cassava25358.m1 Manihot esculenta cassava25358.m1 N 0.000
Ca_04306 Cicer arietinum Ca_04306 N 0.000
chr5.LjT08L18.190.nd Lotus japonicus chr5.LjT08L18.190.nd N 0.000
Ciclev10002467m.g Citrus clementina Ciclev10002467m.g N 0.000
Cla012103 Citrullus lanatus Cla012103 N 0.000
Cucsa.088330 Cucumis sativus Cucsa.088330 N 0.000
gene29104-v1.0-hybrid Fragaria vesca gene29104-v1.0-hybrid N 0.000
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N 0.000
mgf002286m Mimulus guttatus mgf002286m N 0.000
MLOC_10423 Hordeum vulgare MLOC_10423 N 0.000
MTR_1g096340 Medicago truncatula MTR_1g096340 N 0.000
OBART03G40280 Oryza barthii OBART03G40280 N 0.000
OLONG_012145 Oryza longistaminata OLONG_012145 N 0.000
ONIVA03G42160 Oryza nivara ONIVA03G42160 N 0.000
OPUNC03G37470 Oryza punctata OPUNC03G37470 N 0.000
OPUNC03G37490 Oryza punctata OPUNC03G37490 N 0.000
orange1.1g028218m.g Citrus sinensis orange1.1g028218m.g N 0.000
ORGLA03G0371400 Oryza glaberrima ORGLA03G0371400 N 0.000
ORUFI03G42080 Oryza rufipogon ORUFI03G42080 N 0.000
OS03G0838900 Oryza sativa OS03G0838900 N 0.000
Pavir.Ia00190 Panicum virgatum Pavir.Ia00190 N 0.000
Pavir.J01833 Panicum virgatum Pavir.J01833 N 0.000
PGSC0003DMG400009226 Solanum tuberosum PGSC0003DMG400009226 N 0.000
Pm022190 Prunus mume Pm022190 N 0.000
POPTR_0013s11780 Populus trichocarpa POPTR_0013s11780 N 0.000
PRUPE_ppa026991mg Prunus persica PRUPE_ppa026991mg N 0.000
SapurV1A.0179s0060 Salix purpurea SapurV1A.0179s0060 N 0.000
Sb01g001940 Sorghum bicolor Sb01g001940 N 0.000
Solyc11g017430.1 Solanum lycopersicum Solyc11g017430.1 N 0.000
TCM_036345 Theobroma cacao TCM_036345 N 0.000
VIT_18s0072g01130 Vitis vinifera VIT_18s0072g01130 N 0.000