CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UCRNP2_4523
(
Neofusicoccum parvum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
UCRNP2_4523
T386538_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02576
M02597_2.00
Neurospora crassa
NNNCGGVN
NBCCGNNN
PBM
Weirauch et al.(2014)
pTH9668
0.611
0.750
Bcin05g07400
M02571_2.00
Botrytis cinerea
NNNCGGNN
NNCCGNNN
PBM
Weirauch et al.(2014)
pTH8348
0.589
0.833
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOD48743
Zinc cluster
36
75
RACEGCRRRKIKCDAATTNAWPCAACIRLKLNCVPPTVSY
Links
Other
Zinc cluster
family TFs
Other
Neofusicoccum parvum
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy