CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UV8b_3133
(
Ustilaginoidea virens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
UV8b_3133
T386890_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU09033
M02630_2.00
Neurospora crassa
NNNCTCGGBVDN
NHBVCCGAGNNN
PBM
Weirauch et al.(2014)
pTH9473
0.543
0.769
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDB16203
Zinc cluster
69
107
VSCELCKQRKVKCDRGQPSCGWCARNGANCEYKERRRPG
Links
Other
Zinc cluster
family TFs
Other
Ustilaginoidea virens
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy