CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UV8b_6009
(
Ustilaginoidea virens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
UV8b_6009
T386925_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_06788
M01388_2.00
Aspergillus nidulans
NNCGGASTWW
WWASTCCGNN
PBM
Lambert et al.(2019)
pEX0255
0.570
0.650
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDB13138
Zinc cluster
13
52
LACEECRRRKARCDRVRPQCGICAEAGHKCVVVEKRSQRG
Links
Other
Zinc cluster
family TFs
Other
Ustilaginoidea virens
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy