CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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V499_08426
(
Pseudogymnoascus pannorum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
V499_08426
T387109_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAT8
M00102_2.00
Saccharomyces cerevisiae
NNNCCGGAN
NTCCGGNNN
PBM
Badis et al.(2008)
CAT8_4532
0.595
0.615
CAT8
M07529_2.00
Saccharomyces cerevisiae
CCGGRN
NYCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0280.1
0.595
0.615
CAT8
M08688_2.00
Saccharomyces cerevisiae
NCGGNNNDVNGGNN
NNCCNBHNNNCCGN
Misc
DeBoer et al.(2011)
YMR280C_33
0.595
0.615
CAT8
M11485_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6_01
0.595
0.615
CAT8
M11486_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6
0.595
0.615
FGRRES_09921
M02577_2.00
Fusarium graminearum
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7794
0.560
0.564
acu-15
M02616_2.00
Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7801
0.552
0.538
acu-15
M02617_2.00
Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8900
0.552
0.538
ANIA_00689
M11469_2.00
Aspergillus nidulans
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBALL_Q2
0.552
0.538
ANIA_00689
M11470_2.00
Aspergillus nidulans
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCA_Q2
0.552
0.538
ANIA_00689
M11471_2.00
Aspergillus nidulans
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCB_Q2
0.552
0.538
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFY71375
Zinc cluster
81
120
QACDRCRMKKVRCDGIVPTCGRCQAAGLECLTMVKLTRKS
Links
Other
Zinc cluster
family TFs
Other
Pseudogymnoascus pannorum
TFs
218 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy