CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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V499_09066
(
Pseudogymnoascus pannorum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
V499_09066
T387121_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
adv-1
M02624_2.00
Neurospora crassa
VGCGSYWMN
NKWRSCGCB
PBM
Weirauch et al.(2014)
pTH9685
0.612
0.872
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFY70572
Zinc cluster
34
72
TGCYTCRLRRKKCDEGSPCCSACKNLGLECNYKRPMWWS
Links
Other
Zinc cluster
family TFs
Other
Pseudogymnoascus pannorum
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy