CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDAG_08992
(
Verticillium dahliae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDAG_08992
T387412_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05294
M02609_2.00
Neurospora crassa
NBWRSCGAN
NTCGSYWVN
PBM
Weirauch et al.(2014)
pTH7899
0.567
0.892
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.553
0.595
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA
TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.544
0.459
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGY18832
Zinc cluster
45
81
TGCLTCRKRRIKCDEGRPICNNCTKSKRNCEGYNQRV
Links
Other
Zinc cluster
family TFs
Other
Verticillium dahliae
TFs
246 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy