VDBG_01161 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_01161 T387450_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA

TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.540 0.457
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY15052 Zinc cluster 31 65

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSFALG00000011806 Ficedula albicollis ENSFALG00000011806 I 0.000
Brh_R007745 Buceros rhinoceros Brh_R007745 I 0.000
ENSGALG00000020522 Gallus gallus ENSGALG00000020522 I 0.000
myrf Xenopus tropicalis XB-GENE-1020968 I 0.000
MYRF Meleagris gallopavo ENSMGAG00000004733 I 0.000
Alligator_sinensis_CCG012901.1 Alligator sinensis Alligator_sinensis_CCG012901.1 I 0.000
ENSMMUG00000006501 Macaca mulatta ENSMMUG00000006501 I 0.000
Afo_R010549 Aptenodytes forsteri Afo_R010549 I 0.000
Aan_R010750 Calypte anna Aan_R010750 I 0.000
ENSOARG00000020232 Ovis aries ENSOARG00000020232 I 0.000
ENSTGUG00000006600 Taeniopygia guttata ENSTGUG00000006600 I 0.000
ENSPSIG00000015590 Pelodiscus sinensis ENSPSIG00000015590 I 0.000
Cmyd_10008461 Chelonia mydas Cmyd_10008461 I 0.000
ENSSHAG00000002443 Sarcophilus harrisii ENSSHAG00000002443 I 0.000
ENSAPLG00000006054 Anas platyrhynchos ENSAPLG00000006054 I 0.000
Gfo_R011942 Geospiza fortis Gfo_R011942 I 0.000
ENSAMXG00000015793 Astyanax mexicanus ENSAMXG00000015793 I 0.000
Tal_R006175 Tyto alba Tal_R006175 I 0.000
Pvit_15884 Pogona vitticeps Pvit_15884 I 0.000
Ocbimv22003657m.g Octopus bimaculoides Ocbimv22003657m.g N 0.000
ENSTGUG00000007004 Taeniopygia guttata ENSTGUG00000007004 N 0.000
ENSSTOG00000020113 Ictidomys tridecemlineatus ENSSTOG00000020113 N 0.000
Brh_R001107 Buceros rhinoceros Brh_R001107 N 0.000
Aan_R014790 Calypte anna Aan_R014790 N 0.000
Afo_R009725 Aptenodytes forsteri Afo_R009725 N 0.000
Tal_R011346 Tyto alba Tal_R011346 N 0.000
Alligator_sinensis_CCG014201.1 Alligator sinensis Alligator_sinensis_CCG014201.1 N 0.000
Myotis_brandtii_MRF_10004739 Myotis brandtii Myotis_brandtii_MRF_10004739 N 0.000
MYRFL Bos taurus ENSBTAG00000014829 N 0.000
Gfo_R003999 Geospiza fortis Gfo_R003999 N 0.000
ENSMMUP00000039187 Macaca fascicularis ENSMMUP00000039187 N 0.000
ENSBTAP00000019581-D1 Bos grunniens ENSBTAP00000019581-D1 N 0.000
Myrfl Rattus norvegicus ENSRNOG00000021833 N 0.000
MYRFL Felis catus ENSFCAG00000031998 N 0.000
MYRFL Anolis carolinensis ENSACAG00000004738 N 0.000
ENSFALG00000010237 Ficedula albicollis ENSFALG00000010237 N 0.000
MYRFL Dasypus novemcinctus ENSDNOG00000044488 N 0.000
CABZ01077402.1 Danio rerio ENSDARG00000101645 N 0.000
MYRFL Cavia porcellus ENSCPOG00000013850 N 0.000
ENSCJAG00000036263 Callithrix jacchus ENSCJAG00000036263 N 0.000
ENSAPLG00000012837 Anas platyrhynchos ENSAPLG00000012837 N 0.000
ENSAMXG00000021027 Astyanax mexicanus ENSAMXG00000021027 N 0.000
MYRFL Homo sapiens ENSG00000166268 N 0.000
MYRFL Gallus gallus ENSGALG00000019352 N 0.000
MYRFL Loxodonta africana ENSLAFG00000001286 N 0.000
ENSPANG00000002677 Papio anubis ENSPANG00000002677 N 0.000
MYRFL Otolemur garnettii ENSOGAG00000028145 N 0.000
MYRFL Oryctolagus cuniculus ENSOCUG00000002982 N 0.000
MYRFL Ornithorhynchus anatinus ENSOANG00000005958 N 0.000
Myrfl Mus musculus ENSMUSG00000034057 N 0.000
ENSMPUG00000017495 Mustela putorius furo ENSMPUG00000017495 N 0.000
MYRFL Monodelphis domestica ENSMODG00000020385 N 0.000
MYRFL Myotis lucifugus ENSMLUG00000009508 N 0.000
ENSLOCG00000016212 Lepisosteus oculatus ENSLOCG00000016212 N 0.000
ENSAMEG00000011926 Ailuropoda melanoleuca ENSAMEG00000011926 N 0.000