CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_01908
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_01908
T387465_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY15799
Zinc cluster
16
57
RACDQCRIRKADERQIRCDKGTPCSNCRTALRSCSSIGVTHK
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_01908
Verticillium albo atrum
VDBG_01908
N
0.683
NCU09974
Neurospora crassa
NCU09974
N
0.594
VHEMI05407
Torrubiella hemipterigena
VHEMI05407
N
0.592
FOXG_15634
Fusarium oxysporum
FOXG_15634
N
0.570
FVEG_13097
Fusarium verticillioides
FVEG_13097
N
0.570
ANIA_08164
Aspergillus nidulans
CADANIAG00004204
N
0.563
CTHT_0011190
Chaetomium thermophilum
CTHT_0011190
N
0.563
TRIATDRAFT_35132
Trichoderma atroviride
TRIATDRAFT_35132
N
0.563
M438DRAFT_278606
Aureobasidium pullulans
M438DRAFT_278606
N
0.552
AUEXF2481DRAFT_35771
Aureobasidium subglaciale
AUEXF2481DRAFT_35771
N
0.551
M437DRAFT_58120
Aureobasidium melanogenum
M437DRAFT_58120
N
0.549
EURHEDRAFT_408891
Aspergillus ruber
EURHEDRAFT_408891
N
0.547
estExt_Genewise1Plus.C_110207
Cryphonectria parasitica
estExt_Genewise1Plus.C_110207
N
0.545
ACRE_067040
Acremonium chrysogenum
ACRE_067040
N
0.544
MGG_09027
Magnaporthe oryzae
MGG_09027
N
0.541