CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_03734
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_03734
T387496_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02576
M02597_2.00
Neurospora crassa
NNNCGGVN
NBCCGNNN
PBM
Weirauch et al.(2014)
pTH9668
0.660
0.943
Bcin05g07400
M02571_2.00
Botrytis cinerea
NNNCGGNN
NNCCGNNN
PBM
Weirauch et al.(2014)
pTH8348
0.603
0.771
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY17625
Zinc cluster
5
43
RACEGCRRRKIKCDAATTNTWPCSACIRLRLHCVRPNGQ
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy