VDBG_04249 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_04249 T387503_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ff-7
M02603_2.00 		Neurospora crassa
VGCGSNN
NNSCGCB		 PBM
Weirauch et al.(2014)
pTH8817 		0.548 0.750
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY18140 Zinc cluster 234 273

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDAG_01478 Verticillium dahliae VDAG_01478 I 0.683
VDBG_04249 Verticillium albo atrum VDBG_04249 I 0.683
MAM_05054 Metarhizium album MAM_05054 I 0.652
PODANS_4_2530 Podospora anserina PODANS_4_2530 I 0.620
VHEMI00428 Torrubiella hemipterigena VHEMI00428 I 0.620
MGG_08093 Magnaporthe oryzae MGG_08093 I 0.620
GLRG_03456 Colletotrichum graminicola GLRG_03456 N 0.610
CSUB01_04728 Colletotrichum sublineola CSUB01_04728 N 0.610
MGU_05613 Metarhizium guizhouense MGU_05613 I 0.605
X797_010800 Metarhizium robertsii X797_010800 I 0.605
MANI_012280 Metarhizium anisopliae MANI_012280 I 0.605
MBR_04325 Metarhizium brunneum MBR_04325 I 0.605
UV8b_8229 Ustilaginoidea virens UV8b_8229 I 0.605
MAC_03890 Metarhizium acridum MAC_03890 I 0.605
MAJ_05190 Metarhizium majus MAJ_05190 I 0.605
S40285_01325 Stachybotrys chlorohalonata S40285_01325 I 0.603
CFIO01_10586 Colletotrichum fioriniae CFIO01_10586 N 0.596
CH063_12034 Colletotrichum higginsianum CH063_12034 N 0.596
TRIATDRAFT_243083 Trichoderma atroviride TRIATDRAFT_243083 I 0.590
CLUG_05915 Clavispora lusitaniae CLUG_05915 N 0.585
CLUG_05915 Candida lusitaniae CLUG_05915 N 0.585
CTHT_0045110 Chaetomium thermophilum CTHT_0045110 I 0.578
CH063_11092 Colletotrichum higginsianum CH063_11092 N 0.576
TRIVIDRAFT_114462 Trichoderma virens TRIVIDRAFT_114462 I 0.573
PFICI_06028 Pestalotiopsis fici PFICI_06028 I 0.570
CTRG_03975 Candida tropicalis CTRG_03975 N 0.564
VDAG_09170 Verticillium dahliae VDAG_09170 N 0.557
GGTG_06963 Gaeumannomyces graminis GGTG_06963 I 0.556
BBA_08203 Beauveria bassiana BBA_08203 I 0.556
CCM_00925 Cordyceps militaris CCM_00925 I 0.556
scaffold_6-snap.550.1 Neurospora discreta scaffold_6-snap.550.1 I 0.548
SMAC_06177 Sordaria macrospora SMAC_06177 I 0.548
ff-7 Neurospora crassa NCU04001 D 0.548
NEUTE1DRAFT_49802 Neurospora tetrasperma NEUTE1DRAFT_49802 I 0.548
FVEG_02704 Fusarium verticillioides FVEG_02704 I 0.548
FPSE_00487 Fusarium pseudograminearum FPSE_00487 I 0.548
FFUJ_07470 Fusarium fujikuroi FFUJ_07470 I 0.548
FGRRES_10069 Fusarium graminearum FGRRES_10069 I 0.548
BGHDH14_bgh01891 Blumeria graminis BGHDH14_bgh01891 I 0.547
F503_05129 Ophiostoma piceae uamh F503_05129 N 0.546
COCCADRAFT_83759 Bipolaris zeicola COCCADRAFT_83759 N 0.544
COCC4DRAFT_135536 Bipolaris maydis COCC4DRAFT_135536 N 0.544
estExt_fgenesh1_pg.C_150042 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_150042 N 0.544
COCMIDRAFT_97135 Bipolaris oryzae COCMIDRAFT_97135 N 0.544
COCSADRAFT_156072 Bipolaris sorokiniana COCSADRAFT_156072 N 0.544
COCVIDRAFT_106561 Bipolaris victoriae COCVIDRAFT_106561 N 0.544
CADANGAG00011564 Aspergillus niger CADANGAG00011564 I 0.541
PMAA_046250 Penicillium marneffei PMAA_046250 I 0.538
fgeneshTM_pg.13_#_14 Tremella mesenterica fgeneshTM_pg.13_#_14 N 0.538
HMPREF1120_00016 Exophiala dermatitidis HMPREF1120_00016 N 0.538
A1O3_08442 Capronia epimyces A1O3_08442 N 0.538
A1O1_01627 Capronia coronata A1O1_01627 N 0.538
PMAA_046250 Talaromyces marneffei PMAA_046250 I 0.538
PV06_11710 Exophiala oligosperma PV06_11710 N 0.538
TSTA_035500 Talaromyces stipitatus TSTA_035500 I 0.538
S40288_10288 Stachybotrys chartarum S40288_10288 I 0.505