CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_05154
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_05154
T387515_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY19045
Zinc cluster
12
44
SACKRCRERKLGCDAYRPCQLCTRAGVECIPRA
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_05154
Verticillium albo atrum
VDBG_05154
N
0.683
TRIVIDRAFT_191907
Trichoderma virens
TRIVIDRAFT_191907
N
0.609
TRIATDRAFT_292334
Trichoderma atroviride
TRIATDRAFT_292334
N
0.539