CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_08512
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_08512
T387560_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
qa-1F
M11489_2.00
Neurospora crassa
HHGGNTAADBVYTYAWCCBB
VVGGWTRARBVHTTANCCDD
Transfac
Matys et al.(2006)
F$QA1F_01
0.643
0.744
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY22402
Zinc cluster
28
68
RACDQCRSSAREKCDGIQPQCFACVSLNRECTYNVAPKKRG
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_08512
Verticillium albo atrum
VDBG_08512
I
0.683
VDAG_08177
Verticillium dahliae
VDAG_08177
I
0.683
SMAC_07407
Sordaria macrospora
SMAC_07407
I
0.643
MAPG_07478
Magnaporthe poae
MAPG_07478
I
0.643
NEUTE1DRAFT_147986
Neurospora tetrasperma
NEUTE1DRAFT_147986
I
0.643
GGTG_00383
Gaeumannomyces graminis
GGTG_00383
I
0.643
qa-1F
Neurospora crassa
NCU06028
D
0.643
GLRG_07125
Colletotrichum graminicola
GLRG_07125
I
0.636
PODANS_5_5100
Podospora anserina
PODANS_5_5100
I
0.629
W97_04550
Coniosporium apollinis
W97_04550
I
0.621
estExt_Genewise1.C_80993
Neurospora discreta
estExt_Genewise1.C_80993
I
0.620
MPH_01982
Macrophomina phaseolina
MPH_01982
I
0.619
UCRNP2_4108
Neofusicoccum parvum
UCRNP2_4108
I
0.619
F503_06755
Ophiostoma piceae uamh
F503_06755
I
0.617
SPBR_06572
Sporothrix brasiliensis
SPBR_06572
I
0.617
MGG_07777
Magnaporthe oryzae
MGG_07777
I
0.610
MYCTH_2067244
Myceliophthora thermophila
MYCTH_2067244
I
0.604
THITE_2116895
Thielavia terrestris
THITE_2116895
I
0.602
PFICI_15081
Pestalotiopsis fici
PFICI_15081
I
0.594
PVAR5_3766
Byssochlamys spectabilis
PVAR5_3766
I
0.586
estExt_Genewise1Plus.C_50594
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_50594
I
0.584
fgenesh1_pg.C_scaffold_40000014
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_40000014
I
0.584
COCVIDRAFT_27956
Bipolaris victoriae
COCVIDRAFT_27956
I
0.584
COCCADRAFT_5667
Bipolaris zeicola
COCCADRAFT_5667
I
0.584
LEMA_P062270.1
Leptosphaeria maculans
LEMA_P062270.1
I
0.584
PTT_06800
Pyrenophora teres
PTT_06800
I
0.584
SETTUDRAFT_140992
Setosphaeria turcica
SETTUDRAFT_140992
I
0.584
MYCFIDRAFT_170117
Pseudocercospora fijiensis
MYCFIDRAFT_170117
I
0.584
PV09_01109
Verruconis gallopava
PV09_01109
I
0.571
estExt_fgenesh1_pg.C_40955
Cryphonectria parasitica
estExt_fgenesh1_pg.C_40955
I
0.570
PV06_01512
Exophiala oligosperma
PV06_01512
N
0.555
GLOTRDRAFT_78347
Gloeophyllum trabeum
GLOTRDRAFT_78347
N
0.554
EURHEDRAFT_497889
Aspergillus ruber
EURHEDRAFT_497889
I
0.545
HMPREF1624_07664
Sporothrix schenckii
HMPREF1624_07664
I
0.544