TBS1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YBR150C T388332_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and transcription, DNA-templated. Located in mitochondrion and nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBS1
M00076_2.00		 Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN		 PBM
Badis et al.(2008)
TBS1_2130		 (Direct) (Direct)
TBS1
M01571_2.00		 Saccharomyces cerevisiae
NCGGNNNNN
NNNNNCCGN		 PBM
Zhu et al.(2009)
Tbs1		 (Direct) (Direct)
TBS1
M07503_2.00		 Saccharomyces cerevisiae
CGGNTCCG
CGGANCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0404.1		 (Direct) (Direct)
TBS1
M08645_2.00		 Saccharomyces cerevisiae
CGGNTCCG
CGGANCCG		 Misc
DeBoer et al.(2011)
YBR150C_552		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00076_2.00 Zinc cluster 51 94
M01571_2.00 Zinc cluster 105 148

DNA Binding Domains

Protein ID Domain From To Sequence
YBR150C Zinc cluster 105 148

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
676_Multiple Saccharomyces mikatae 676_Multiple I 0.675
1758_YLR377C Saccharomyces bayanus 1758_YLR377C I 0.675
1615_YBR150C Saccharomyces paradoxus 1615_YBR150C I 0.667
SKUD_205109 Saccharomyces kudriavzevii SKUD_205109 I 0.658