ERT1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YBR239C T388333_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Involved in negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source and positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERT1
M00077_2.00		 Saccharomyces cerevisiae
NYCGGAAY
RTTCCGRN		 PBM
Badis et al.(2008)
YBR239C_2158		 (Direct) (Direct)
ERT1
M01572_2.00		 Saccharomyces cerevisiae
NNCGGARNN
NNYTCCGNN		 PBM
Zhu et al.(2009)
Ybr239c		 (Direct) (Direct)
ERT1
M07504_2.00		 Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0420.1		 (Direct) (Direct)
ERT1
M08646_2.00		 Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH		 Misc
DeBoer et al.(2011)
YBR239C_564		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00077_2.00 Zinc cluster 37 77
M01572_2.00 Zinc cluster 38 78

DNA Binding Domains

Protein ID Domain From To Sequence
YBR239C Zinc cluster 38 78

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
2111_Multiple Saccharomyces bayanus 2111_Multiple I 0.683
SKUD_138701 Saccharomyces kudriavzevii SKUD_138701 I 0.683
1958_YBR239C Saccharomyces paradoxus 1958_YBR239C I 0.683
4840_YBR239C Saccharomyces mikatae 4840_YBR239C I 0.666
SU7_0276 Saccharomyces arboricola SU7_0276 I 0.666
ZYRO0G21582g Zygosaccharomyces rouxii ZYRO0G21582g I 0.625
TDEL_0B04020 Torulaspora delbrueckii TDEL_0B04020 I 0.597
NDAI_0F02030 Naumovozyma dairenensis NDAI_0F02030 I 0.577
CAGL0K06985g Candida glabrata CAGL0K06985g I 0.556
TBLA_0D03550 Tetrapisispora blattae TBLA_0D03550 I 0.538